Refactoring

loosolab · Dec 19, 2018 · ce52871 · ce52871
1 parent 6d5c604
commit ce52871
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/bin/bed_to_fasta.R b/bin/bed_to_fasta.R
@@ -55,4 +55,4 @@ bed_to_fasta <- function(bedInput, prefix = "", min_seq = 100){
 # run function bed_to_fasta with given parameteres if not in interactive context (e.g. run from shell)
 if (!interactive()) {
   bed_to_fasta(opt$input, opt$prefix, opt$min_seq)
-}
+}
diff --git a/pipeline.nf b/pipeline.nf
@@ -283,7 +283,7 @@ process reduce_bed {
 	"""
 	Rscript ${path_bin}/reduce_bed.R -i ${bed} -k ${params.kmer} -m ${params.aprox_motif_len} -o ${name}_reduced.bed -t ${params.threads} -f ${params.motif_occurence} -s ${params.min_seq_length}
 	"""
-}String
+}
 
 
 /*