Removed debugging code

loosolab · Jan 23, 2019 · e2494a0 · e2494a0
1 parent 7e90339
commit e2494a0
Showing 1 changed file with 1 addition and 4 deletions.
diff --git a/pipeline.nf b/pipeline.nf
@@ -35,7 +35,7 @@
   	params.identity=0.8
   	params.sequence_coverage=8
   	params.memory=800
- 		params.throw_away_seq=9
+ 	params.throw_away_seq=9
   	params.strand=0
 
 //motif_estimation
@@ -289,9 +289,6 @@ process reduce_sequence {
 	set name, file ('*.bed') into bed_for_clustering
 	file ('*.log')
 
-	when:
-	params.lalal == "1"
-
 	script:
 	"""
 	Rscript ${path_bin}/2.1_clustering/reduce_sequence.R -i ${bed} -k ${params.kmer} -m ${params.aprox_motif_len} -o ${name}_reduced.bed -t ${params.threads} -f ${params.motif_occurence} -s ${params.min_seq_length} --summary reduce_sequence.log