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fixed .bed.bed unconsitent output name #64

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Jan 13, 2019
Merged

fixed .bed.bed unconsitent output name #64

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3 changes: 2 additions & 1 deletion bin/1.2_filter_motifs/compareBed.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -176,7 +176,8 @@ then
echo "directory $workdir does not exist. Please check parameter -w / --workdir"
exit 1
fi
if [[ ${output: -4: -1} != '.bed' ]]
# check if output path ends with .bed. If not, the filename is extended by ".bed"
if [[ ${output: -4} != '.bed' ]]
then
output=`echo $output | sed "s|$|.bed|g"`
fi
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