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Peak calling to dev #68

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Jan 14, 2019
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Peak calling to dev #68

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bd41980
Merge pull request #67 from loosolab/dev
anastasiia Jan 14, 2019
6258bfe
rename the parameter for 1.1! min_gap instead of max_bp_between
anastasiia Jan 14, 2019
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -69,7 +69,7 @@ Optional arguments:
--window_length INT This parameter sets the length of a sliding window. (Default: 200)
--step INT This parameter sets the number of positions to slide the window forward. (Default: 100)
--percentage INT Threshold in percent (Default: 0)
--max_bp_between INT If footprints are less than X bases appart the footprints will be merged (Default: 6)
--min_gap INT If footprints are less than X bases appart the footprints will be merged (Default: 6)

Filter motifs:
--min_size_fp INT Minimum sequence length threshold. Smaller sequences are discarded. (Default: 10)
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