plotExpression.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/plotting.R
\name{plotExpression}
\alias{plotExpression}
\title{Plot Gene Expression}
\usage{
plotExpression(expression, plotsPerPage = 1, GenesToPlot = 100,
  plotName = "expression")
}
\arguments{
\item{expression}{The gene expression data frame that shall be plotted}

\item{plotsPerPage}{The number of plots per Page (has to be a divisor of
GenesToPlot)}

\item{GenesToPlot}{The number of genes to be plotted}

\item{plotName}{The name of the plot without .pdf}
}
\value{
The name of the plot in the pdf file
}
\description{
Plots the (simulated) gene expression data frame, creates a pdf file
}
\examples{
\dontrun{
params <- newParams(nGenes = list("1"=5,"2"=list("gauss"= 5,"gamma"= 5)))
simulation <- simulateExpression(params= params,verbose=FALSE)
expression <- simulation$expressionData
plotExpression(expression,plotsPerPage = 4,GenesToPlot = 12,plotName = "plot12Genes")
plotExpression(expression,plotsPerPage = 5,GenesToPlot = nrow(expression),
plotName = "plotAllGenes")
}

}