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usrlocalpkg: Make python-3.11.7 the new default
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Added shortcuts:
- for two Zeiss czi-image tools.
- all deeptool plot commands
- truvari, whatshap are used by ONT pipelines
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thomas committed Jan 9, 2024
1 parent bd43aae commit 6cab7a5
Showing 1 changed file with 7 additions and 3 deletions.
10 changes: 7 additions & 3 deletions usrlocalpkg/admin/config
Original file line number Diff line number Diff line change
Expand Up @@ -1437,15 +1437,13 @@ python-3.11=python-3.11.7-0
python3.11-config
pip3.11
pydoc3.11
truvari
whatshap

python3.11=python-3.11


# b) default python, see PEP 0394 too

python-3=python-3.10
python-3=python-3.11
python3
python3-config
idle3=idle
Expand All @@ -1468,6 +1466,8 @@ python=python-3
computeMatrixOperations
cooler
cutadapt
czi2tif
czifile
deeptools
git-cola
git-dag
Expand All @@ -1489,16 +1489,20 @@ python=python-3
pip
plotCorrelation
plotCoverage
plotEnrichment
plotFingerprint
plotHeatmap
plotPCA
plotProfile
snakemake
spyder
stg
tadtool
truvari
umi_tools
virtualenv
virtualenv3=virtualenv
whatshap

pypy=pypy-3.10-v7.3.13-0
pypy
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