Commits on May 22, 2025

1. mxqi: Add underscore to MXQD_JOB_TMPDIR name to forward it properly …

       $ mxqi -h
       Unknown option: h
   
       usage: /usr/bin/mxqi OPTIONS
   
           OPTIONS:
   
           -j n | --processors n    # set number of processors    (default: 4)
           -m SIZE | --memory SIZE  # set amount of memory        (default: 40G)
           --tmpdir SIZE            # set size of MXQ_JOB_TMPDIR  (default: 100G)
       […]
   
   Currently, running an interactive session, the environment variable
   `MXQD_JOB_TMPDIR` is not set due to a missing underscore in the variable
   name, that causes it to not get forwarded.
   
       @hotelcalifornia:~$ env
       SHELL=/usr/bin/bash
       MXQ_SERVERID=main
       MXQ_JOBID=54915408
       MXQI_SUBMIT_WD=/home/pmenzel
       PWD=/home/pmenzel
       LOGNAME=pmenzel
       HOME=/home/pmenzel
       TMPDIR=/dev/shm/mxqd/mnt/job/54915408
       PERL5LIB=/home/pmenzel/perl5/lib/perl5
       MXQ_THREADS=4
       MXQ_TIME=600
       SSH_CONNECTION=141.14.21.78 38894 141.14.16.151 34371
       MXQ_MEMORY=40960
       TERM=xterm-256color
       PERL_MB_OPT=--install_base "/home/pmenzel/perl5"
       USER=pmenzel
       MXQ_HOSTNAME=hotelcalifornia.molgen.mpg.de
       MXQ_HOSTID=12c86da0-a55a-4b72-b587-6b40f466b0b6-436a9-a22
       PERL_MM_OPT=INSTALL_BASE=/home/pmenzel/perl5
       SHLVL=1
       LC_CTYPE=en_US.UTF-8
       PS1=\u@\h:\w\$
       SSH_CLIENT=141.14.21.78 38894 34371
       PERL_LOCAL_LIB_ROOT=/home/pmenzel/perl5
       PATH=/home/pmenzel/perl5/bin:/usr/local/package/bin:/usr/local/bin:/usr/sbin:/usr/bin:/home/pmenzel/bin:/home/pmenzel/.cargo/bin
       MXQ_SLOTS=6
       JOB_ID=54915408
       MAIL=/var/mail/pmenzel
       SSH_TTY=/dev/pts/0
       _=/usr/bin/env
   
   Add the _ score, so it’s correctly matched.

   

   pmenzel committed May 22, 2025
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