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Changed flag to samFLAGS.
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This fixes issue #1, however I still need to test this latest version.
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Greg Zynda committed Mar 23, 2016
1 parent 3a6715a commit 3b7fa4d
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion methratio.py
Original file line number Diff line number Diff line change
@@ -48,7 +48,7 @@ def parseFLAG(intFlag):
this feature was removed.
'''
binFlag = bin(intFlag)[:1:-1]
return set(compress(flags,map(int,binFlag)))
return set(compress(samFLAGS,map(int,binFlag)))

if len(options.outfile) == 0: disp("Missing output file name, write to STDOUT.")
def get_alignment(line):

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