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Updated code comments
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Vera N. Karlbauer committed Mar 7, 2025
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@@ -99,6 +99,7 @@ save(Betas_clean_filtered_quantile_bmiq, file = paste0(user_choices$project_name

```{r normalize unfiltered probes, include=FALSE}
# Normalization of unfiltered data
# Functional normalization
gRatioSet_clean_unfiltered_quantile <- preprocessQuantile(RGSet_clean)
save(gRatioSet_clean_unfiltered_quantile, file = paste0(user_choices$project_name,
"/processed_data/gRatioSet_clean_unfiltered_quantile.Rdata")) # output: GenomicRatioSet

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