change order of script 6 & 7

mpip · Mar 15, 2024 · d1c9c4b · d1c9c4b
1 parent 0170337
commit d1c9c4b
Showing 4 changed files with 4 additions and 4 deletions.
diff --git a/pipeline_flowchart/pipeline_flowchart.Rmd b/pipeline_flowchart/pipeline_flowchart.Rmd
@@ -19,16 +19,16 @@ data <- tibble::tibble(from = c("Define Data Properties & Locations,
                                 "Quality Control (Script 3)",
                                 "Check Matching Epigenetic Sex (Script 4)",
                                 "Samples Exclusion (Script 5)",
-                                "Normalization (Script 6)",
-                                "Filtering CpGs (Script 7)",
+                                "Filtering CpGs (Script 6)",
+                                "Normalization (Script 7)",
                                 "Removal of Outliers & Detection of Batch Effects (Script 8)",
                                 "Correction of Technical Batch Effects - Filtered Data (Script 9)"),
                        to = c("Import Raw DNAm (Script 2)",
                               "Quality Control (Script 3)",
                                 "Check Matching Epigenetic Sex (Script 4)",
                                 "Samples Exclusion (Script 5)",
-                                "Normalization (Script 6)",
-                                "Filtering CpGs (Script 7)",
+                                "Filtering CpGs (Script 6)",
+                                "Normalization (Script 7)",
                                 "Removal of Outliers & Detection of Batch Effects (Script 8)",
                                 "Correction of Technical Batch Effects - Filtered Data (Script 9)",
                                 "Correction of Technical Batch Effects - Unfiltered Data (Script 10)"))

diff --git a/pipeline_flowchart/pipeline_flowchart.pdf b/pipeline_flowchart/pipeline_flowchart.pdf
diff --git a/scripts/7_filtering_cpgs.Rmd → scripts/6_filtering_cpgs.Rmd b/scripts/7_filtering_cpgs.Rmd → scripts/6_filtering_cpgs.Rmd
diff --git a/scripts/6_normalization.Rmd → scripts/7_normalization.Rmd b/scripts/6_normalization.Rmd → scripts/7_normalization.Rmd