adding data and setting up gitignore

proost · May 8, 2017 · 07efab8 · 07efab8
1 parent 7fb630d
commit 07efab8
Show file tree

Hide file tree

Showing 5 changed files with 39,359 additions and 0 deletions.
diff --git a/.gitignore b/.gitignore
@@ -87,3 +87,6 @@ ENV/
 
 # Rope project settings
 .ropeproject
+
+.idea
+.idea/
diff --git a/TE_DB/README.md b/TE_DB/README.md
@@ -0,0 +1,12 @@
+#TE_DB
+
+Fasta file with known *transposable element proteins*. Should have .fasta as their extension (all .fasta file in this 
+directory will be used to build the final blast DB)
+
+## Sources
+
+  * maize_uniprotkb_TE.fasta: Transposable element proteins from UniProtKB with term KW-0814 annotated
+  * rice_TE_only.fasta: Transposable element proteins from the rice genome
+  * ath_TE.fasta: Translated ORFs from transposable elements from *Arabidopsis thaliana* (min. length 50 aa)
+
+