renamed fasta_to_gtf.py to fasta_to_gff.py

proost · May 11, 2017 · 40c6b98 · 40c6b98
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diff --git a/README.md b/README.md
@@ -87,10 +87,10 @@ Details for each script can be found [here](docs/helper.md)
 ## Running LSTrAP on transcriptome data
 
 To use LSTrAP on a *de novo* assembled transcriptome a little pre-processing is required. Instead of the genome a fasta 
-file containing **coding** sequences can be used (remove UTRs). Using the helper script fasta_to_gtf.py a gtf file suited
+file containing **coding** sequences can be used (remove UTRs). Using the helper script fasta_to_gff.py a gff file suited
 for LSTrAP can be generated.
 
-    python3 fasta_to_gtf.py /path/to/transcript.cds.fasta > output.gtf
+    python3 fasta_to_gff.py /path/to/transcript.cds.fasta > output.gff
 
 ## Adapting LSTrAP to other cluster managers
 

diff --git a/helper/fasta_to_gtf.py → helper/fasta_to_gff.py b/helper/fasta_to_gtf.py → helper/fasta_to_gff.py