Recent Repositories

  • Snakemake pipeline for running TOBIAS analysis

    Python MIT Updated Mar 22, 2019
  • Demonstration of PCA and tsne with the 1000 genomes SNP data

    Jupyter Notebook Updated Mar 20, 2019
  • Updated Mar 20, 2019
  • Matlab Updated Mar 11, 2019
  • Dockercontainer for etherpad-lite with useful plugins

    Shell Updated Mar 6, 2019
  • Allen intensities of user-requested brain region.

    Matlab Updated Mar 21, 2019
  • Julia Updated Mar 21, 2019
  • MetAdata fRom Mass SpectromETry - command line tool

    C# Updated Mar 8, 2019
  • Preprocessing and data visualization of meta data from multimodalR

    R 1 Updated Mar 22, 2019
  • MetAdata fRom Mass SpectromETry - R package

    R 2 Updated Feb 12, 2019
  • Updated Jan 24, 2019
  • removes and replaces unwanted header values from DICOM images such as OperatorsName or PerformingPhysiciansName

    Python Updated Mar 5, 2019
  • python module that provides some tools helping coregsitration with mipav & ants

    Python Updated Jan 21, 2019
  • OpenGaze: Open Source Toolkit for Camera-Based Gaze Estimation and Interaction

    C++ Updated Jan 31, 2019
  • CSS / Phoebus Files

    Gnuplot Updated Feb 22, 2019
  • Python 1 Updated Dec 13, 2018
  • Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    Python 1 MIT Updated Mar 22, 2019
  • Viewer for spectral data using Matlab

    Matlab Updated Dec 5, 2018
  • Java Updated Dec 13, 2018
  • C Updated Jan 3, 2019
  • Some data workflows used here in our group

    Shell Updated Feb 26, 2019
  • This small script takes a list of genes of interest and finds the number of exons in these genes.

    Python MIT Updated Jan 20, 2019
  • Python Updated Jan 11, 2019
  • create a Genome Browser Track of linearised genomic coverage (removing introns).

    Perl GPL-3.0 Updated Dec 13, 2018
  • Public version with development branches to be accessed by collaborators

    Matlab GPL-2.0 Updated Mar 19, 2019
  • Updated Nov 11, 2018
  • Installation files for openBIS version 16.05.7

    HTML Updated Nov 2, 2018
  • Updated Nov 2, 2018
  • CRUP is a workflow consisting of three main steps (CRUP - EP, CRUP - ED, CRUP - ED) and an additonal pre-preparing step (CRUP - normalize), whereas each step build upon one another. CRUP collapses different layers of epigenetic information into a single list of regulatory units consisting of dynamically changing enhancers and target genes.

    R Updated Nov 1, 2018
  • fuzzy Feature cluster ImPact on PAtient cluster

    Matlab Updated Nov 19, 2018