Recent Repositories

  • TOBIAS_snakemake

    Snakemake pipeline for running TOBIAS analysis

    Python MIT Updated Mar 22, 2019

  • 2d_embeddings_1kg

    Demonstration of PCA and tsne with the 1000 genomes SNP data

    Jupyter Notebook Updated Mar 20, 2019

  • Schach-dem-Wildschwein

    Updated Mar 20, 2019

  • Atlas_Norm_Dartel

    Matlab Updated Mar 11, 2019

  • bit_etherpad-lite-docker

    Dockercontainer for etherpad-lite with useful plugins

    Shell Updated Mar 6, 2019

  • Annotation_Task

    Allen intensities of user-requested brain region.

    Matlab Updated Mar 21, 2019

  • V1Novelty

    Julia Updated Mar 21, 2019

  • MARMoSET_C

    MetAdata fRom Mass SpectromETry - command line tool

    C# Updated Mar 8, 2019

  • mmRmeta

    Preprocessing and data visualization of meta data from multimodalR

    R 1 Updated Mar 22, 2019

  • MARMoSET

    MetAdata fRom Mass SpectromETry - R package

    R 2 Updated Feb 12, 2019

  • Java_1.8.0_191

    Updated Jan 24, 2019

  • dicomclean

    removes and replaces unwanted header values from DICOM images such as OperatorsName or PerformingPhysiciansName

    Python Updated Mar 5, 2019

  • coregistration

    python module that provides some tools helping coregsitration with mipav & ants

    Python Updated Jan 21, 2019

  • opengaze

    OpenGaze: Open Source Toolkit for Camera-Based Gaze Estimation and Interaction

    C++ Updated Jan 31, 2019

  • cryvisil

    CSS / Phoebus Files

    Gnuplot Updated Feb 22, 2019

  • python-methods-club

    Python 1 Updated Dec 13, 2018

  • TOBIAS

    Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    bioinformatics atac-seq footprinting
    Python 1 MIT Updated Mar 22, 2019

  • SpectraViewer-ML

    Viewer for spectral data using Matlab

    Matlab Updated Dec 5, 2018

  • ERuleLearner

    Java Updated Dec 13, 2018

  • fibonacci

    C Updated Jan 3, 2019

  • data_workflows

    Some data workflows used here in our group

    Shell Updated Feb 26, 2019

  • find_exons_number

    This small script takes a list of genes of interest and finds the number of exons in these genes.

    Python MIT Updated Jan 20, 2019

  • screenly-pro

    Python Updated Jan 11, 2019

  • MetaGeneView

    create a Genome Browser Track of linearised genomic coverage (removing introns).

    Perl GPL-3.0 Updated Dec 13, 2018

  • hMRI-toolbox-public

    Public version with development branches to be accessed by collaborators

    Matlab GPL-2.0 Updated Mar 19, 2019

  • spatial-gaze-asymmetry

    Updated Nov 11, 2018

  • openBIS

    Installation files for openBIS version 16.05.7

    HTML Updated Nov 2, 2018

  • TestRepo

    Updated Nov 2, 2018

  • CRUP

    CRUP is a workflow consisting of three main steps (CRUP - EP, CRUP - ED, CRUP - ED) and an additonal pre-preparing step (CRUP - normalize), whereas each step build upon one another. CRUP collapses different layers of epigenetic information into a single list of regulatory units consisting of dynamically changing enhancers and target genes.

    R Updated Nov 1, 2018

  • fFIPPA

    fuzzy Feature cluster ImPact on PAtient cluster

    Matlab Updated Nov 19, 2018