Recent Repositories

MetAdata fRom Mass SpectromETry - R package

removes and replaces unwanted header values from DICOM images such as OperatorsName or PerformingPhysiciansName

python module that provides some tools helping coregsitration with mipav & ants

OpenGaze: Open Source Toolkit for Camera-Based Gaze Estimation and Interaction

CSS / Phoebus Files

Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

Viewer for spectral data using Matlab

Some data workflows used here in our group

This small script takes a list of genes of interest and finds the number of exons in these genes.

create a Genome Browser Track of linearised genomic coverage (removing introns).

Public version with development branches to be accessed by collaborators

Installation files for openBIS version 16.05.7

CRUP is a workflow consisting of three main steps (CRUP - EP, CRUP - ED, CRUP - ED) and an additonal pre-preparing step (CRUP - normalize), whereas each step build upon one another. CRUP collapses different layers of epigenetic information into a single list of regulatory units consisting of dynamically changing enhancers and target genes.

fuzzy Feature cluster ImPact on PAtient cluster

Django Conference Tool

Project to learn Git Hub.

fork from github.com

This repository provides the code for running the simulations described in 'Robustness of neural circuits with disparate components to intrinsic perturbations'

batch run for cellranger count

Weighted Motif Enrichment Analysis