Recent Repositories

  • Some data workflows used here in our group

    Shell Updated Nov 15, 2018
  • This small script takes a list of genes of interest and finds the number of exons in these genes.

    Python MIT Updated Nov 15, 2018
  • Python Updated Nov 14, 2018
  • create a Genome Browser Track of linearised genomic coverage (removing introns).

    Perl GPL-3.0 Updated Nov 15, 2018
  • Public version with development branches to be accessed by collaborators

    Matlab GPL-2.0 Updated Nov 13, 2018
  • Updated Nov 11, 2018
  • Installation files for openBIS version 16.05.7

    HTML Updated Nov 2, 2018
  • Updated Nov 2, 2018
  • CRUP is a workflow consisting of three main steps (CRUP - EP, CRUP - ED, CRUP - ED) and an additonal pre-preparing step (CRUP - normalize), whereas each step build upon one another. CRUP collapses different layers of epigenetic information into a single list of regulatory units consisting of dynamically changing enhancers and target genes.

    R Updated Nov 1, 2018
  • fuzzy Feature cluster ImPact on PAtient cluster

    R Updated Oct 30, 2018
  • Django Conference Tool

    Python BSD-3-Clause Updated Oct 30, 2018
  • Project to learn Git Hub.

    Matlab Updated Nov 7, 2018
  • fork from github.com

    Updated Oct 22, 2018
  • This repository provides the code for running the simulations described in 'Robustness of neural circuits with disparate components to intrinsic perturbations'

    C++ Updated Oct 22, 2018
  • R Updated Oct 21, 2018
  • batch run for cellranger count

    Perl Updated Nov 4, 2018
  • Tools for the selection function estimations

    Python Updated Oct 30, 2018
  • simple viewer for ZISRAW images

    C++ Updated Nov 8, 2018
  • Weighted Motif Enrichment Analysis

    Python 1 MIT Updated Oct 25, 2018
  • Produce counts files for all index pairs in Illumina sequencing runs

    Clojure Updated Sep 24, 2018
  • Die Folien für meinen Vortrag zu Nevernote auf der DV-Tagung 2018

    Updated Sep 25, 2018
  • C Updated Sep 19, 2018
  • Runs the Aeron Media Driver for use by Onyx

    Updated Sep 11, 2018
  • Frontend View for People sicweb_people_import for Wordpress

    PHP Updated Oct 25, 2018
  • Dispatcher for overseer jobs

    Clojure Updated Sep 10, 2018
  • Matlab Updated Sep 7, 2018
  • CNN for freezing event detection in mice

    Updated Sep 6, 2018
  • Web interface for overseer

    Clojure Updated Sep 21, 2018
  • Port of the conformity schema management library to mentat

    Clojure Updated Sep 6, 2018
  • This is the peer / api / client for the mentat database. Communicates with mentat-kafka the transactor / server.

    Clojure Updated Sep 5, 2018