add_coldata_classification.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/add_coldata_classification.R
\name{add_coldata_classification}
\alias{add_coldata_classification}
\title{Add Classification Counts to colData}
\usage{
add_coldata_classification(
  summarized_experiment,
  assay_index = 3,
  to_coldata = F,
  column_data = NULL
)
}
\arguments{
\item{assay_index}{Integer - index of assay of classification made by mclust}

\item{to_coldata}{Logical - should the count matrix be added to colData/column_data?}

\item{column_data}{Data frame like object}
}
\value{
SummarizedExperiment or data frame with additonal columns.
}
\description{
This function adds new columns showing the counts of the overall classification of a sample.
}
\details{
If summarized_experiment is not a SummarizedExperiment then give a matrix where samples are in columns and genes are in rows.
}