filter_small_binary.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/preprocess_coldata.R
\name{filter_small_binary}
\alias{filter_small_binary}
\title{Drop Binary Factors With Few Counts}
\usage{
filter_small_binary(
  summarized_experiment,
  min_counts = 10,
  exception = NULL,
  verbose = T
)
}
\arguments{
\item{summarized_experiment}{Data frame or SE}

\item{min_counts}{Integer - minimum amount of counts in factor level}

\item{exception}{Character - column names of eceptions if they would fall below threshold. Uses grep}

\item{verbose}{Logical - prints names of dropped columns}
}
\value{
Returns the input object with dropped columns
}
\description{
This function drops binary factors that have a level with very feq counts.
}