merge_duplicated_se.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/merge_duplicated.R
\name{merge_duplicated_se}
\alias{merge_duplicated_se}
\title{Function Merging Duplicated Entries for SE}
\usage{
merge_duplicated_se(
  summarized_experiment,
  assay_index = 1,
  method = "median",
  shorten_names = F,
  pos_1 = 1,
  pos_2 = 12,
  original_names = F,
  unnest = F,
  ...
)
}
\arguments{
\item{shorten_names}{Logical - Should names be shortenend by int_1 and int_2}

\item{pos_1}{Integer - Position 1 for substr}

\item{pos_2}{Integer - Position 2 for substr}

\item{original_names}{Logical - Change column names back to original format(bevore shortening)}

\item{unnest}{Logical - Should colData be unnested? May lead to errors}

\item{data}{Matrix like object or summarized experiment with rownames}

\item{margin}{Integer - Rowwise or Columnwisem usually column because these are the patients/samples}
}
\description{
This function combines duplicated entries by a given mathematical method. (Like Mean, Median)
}