test_install.sh

#!/bin/bash


echo 'Preparing for testing ...'
cp config-comik.txt config-comik-test.txt

sed -i 's/OUTPUT_FOLDER=comik_run_simulated_dataset1/OUTPUT_FOLDER=test_comik_run_simulated_dataset1/g' config-comik-test.txt

sed -i 's/NUMBER_OF_CLUSTERS=\[2 5 7]/NUMBER_OF_CLUSTERS=\[7\]/g' config-comik-test.txt
sed -i 's/SIGMA_VALUES=10\.\^\[1\:1\:2\]/SIGMA_VALUES=10\.\^\[1\]/g' config-comik-test.txt
sed -i 's/COST_VALUES=10\.\^\[-3\:1\:3\]/COST_VALUES=10\.\^\[1\]/g' config-comik-test.txt

sed -i 's/NUMBER_OF_INNER_FOLDS=5/NUMBER_OF_INNER_FOLDS=2/g' config-comik-test.txt
sed -i 's/NUMBER_OF_OUTER_FOLDS=5/NUMBER_OF_OUTER_FOLDS=3/g' config-comik-test.txt


if [ "$1" = "executable" ]
then
    echo "Only testing the executable ... this might take some time"
    if [ "$3" = "v86" ];
    then
	if [ -f "run_CoMIK_v86.sh" ];
	then
            ./run_CoMIK_v86.sh $2 config-comik-test.txt
	fi
    elif [ "$3" = "v90" ];
    then
	if [ -f "run_CoMIK_v90.sh" ];
	then
            ./run_CoMIK_v90.sh $2 config-comik-test.txt
	fi
    else
        echo 'No file to run.'
    fi
elif [ "$1" = "matlab" ]
then
    echo 'Only testing inside MATLAB ... this might take some time'
    matlab -nodesktop -nodisplay -nosplash  -r "comik_wrapper('config-comik-test.txt'); exit;"
else
   echo 'Testing both executable and from inside matlab ... this might take some time'
fi

if [ -d "$test_comik_run_simulated_dataset1"]; then
    rm -rf test_comik_run_simulated_dataset1/
    rm config-comik-test.txt
fi
echo "Done."