Skip to content
This repository has been archived by the owner. It is now read-only.

Commit

Permalink
Browse files Browse the repository at this point in the history
update
  • Loading branch information
MPIBR-toschesm committed May 18, 2018
1 parent 7ac40c2 commit b80d5ce
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion Dim_reduction_clustering_DEanalysis/DE_analysis_functions.R
Expand Up @@ -10,7 +10,8 @@ library(data.table)
# min.pct = minimum percentage of cells expressing the gene
# thresh.use = minimum AVERAGE DIFFERENCE for filtering, in log scale (base e), e.g. for 1.5 fold change, type log(1.5)
# data.info.col = column number for columns in data.info that contain metadata (not clusters...)



FindMarkers.MAST <- function(object, id1, id2, min.pct, thresh.use,data.info.col = 1:13){

cells.1 <- names(object@ident[object@ident == id1])
Expand Down

0 comments on commit b80d5ce

Please sign in to comment.