MPI Brain Bioinformatic Tools

Repositories

NeuroUTRs Public

Diversity, usage and properties of mRNA 3'UTR isoforms in neuronal compartments

Matlab 0 0 1 0 Updated Jun 27, 2022
CodonUsage Public

Matlab LGPL-3.0 0 0 0 0 Updated May 4, 2020
SBatchGenerator Public archive

batch run for cellranger count

Perl 0 0 0 0 Updated Feb 5, 2019
MetaGeneView Public

create a Genome Browser Track of linearised genomic coverage (removing introns).

Perl GPL-3.0 0 0 0 0 Updated Dec 13, 2018
GOAnalysis Public

Perform gene ontology analysis of two unrancked lists.

Perl 0 0 0 0 Updated Dec 3, 2018
brainseq Public

Perl 0 0 0 0 Updated Oct 5, 2018
PASSFinder Public

cluster PolyA supported sites from 3'End sequencing

C GPL-3.0 0 0 1 0 Updated Sep 13, 2018
pymol-install Public

PyMol installation instructions

0 0 0 0 Updated Sep 22, 2017
PASSAnnotator Public

Annotates Poly(A) supported sites to RefSeq annotation

Perl 0 0 0 0 Updated May 20, 2017
LTP-transcriptomics Public

Protocol for the bioinformatics analysis of the LTP transcriptomics project

Matlab 0 0 0 0 Updated Mar 31, 2017
parseGeneBankFile Public

Parse GeneBank protein file to extract annotation information

Perl 0 0 2 0 Updated Sep 23, 2016
AtypicalNeuroNGlycans Public

Matlab GPL-3.0 0 0 0 0 Updated Sep 20, 2016