MPI Brain Bioinformatic Tools

Tools for processing next generation sequencing data

CodonUsage Public

Matlab 0 LGPL-3.0 0 0 0 Updated May 4, 2020
SBatchGenerator Public archive
batch run for cellranger count

Perl 0 0 0 0 Updated Feb 5, 2019
MetaGeneView Public
create a Genome Browser Track of linearised genomic coverage (removing introns).

Perl 0 GPL-3.0 0 0 0 Updated Dec 13, 2018
GOAnalysis Public
Perform gene ontology analysis of two unrancked lists.

Perl 0 0 0 0 Updated Dec 3, 2018
brainseq Public

Perl 0 0 0 0 Updated Oct 5, 2018
PASSFinder Public
cluster PolyA supported sites from 3'End sequencing

C 0 GPL-3.0 0 1 0 Updated Sep 13, 2018
pymol-install Public
PyMol installation instructions

0 0 0 0 Updated Sep 22, 2017
NeuroUTRs Public
Diversity, usage and properties of mRNA 3'UTR isoforms in neuronal compartments

Matlab 0 0 1 0 Updated Jun 14, 2017
PASSAnnotator Public
Annotates Poly(A) supported sites to RefSeq annotation

Perl 0 0 0 0 Updated May 20, 2017
LTP-transcriptomics Public
Protocol for the bioinformatics analysis of the LTP transcriptomics project

Matlab 0 0 0 0 Updated Mar 31, 2017

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