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CoNekT/conekt/templates/base.html

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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width">
<title>{% block title %}{% endblock %}</title>
<link rel="shortcut icon" href="{{ url_for('static', filename='favicon.ico') }}">
<link href="{{ url_for('static', filename='css/bootstrap.min.css') }}" rel="stylesheet">
<link href="{{ url_for('static', filename='css/bootstrap-slider.min.css') }}" rel="stylesheet">
<link href="{{ url_for('static', filename='css/jquery.qtip.min.css') }}" rel="stylesheet">
<link href="{{ url_for('static', filename='css/font-awesome.min.css') }}" rel="stylesheet">
<link href="{{ url_for('static', filename='css/typeahead.css') }}" rel="stylesheet">
<link href="{{ url_for('static', filename='css/tabbed_panel.css') }}" rel="stylesheet">
<link href="{{ url_for('static', filename='css/phyd3.min.css') }}" rel="stylesheet">
<link href="{{ url_for('static', filename='css/main.css') }}" rel="stylesheet">
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='css/cookieconsent.min.css') }}" />
<script src="{{ url_for('static', filename='js/cookieconsent.min.js') }}"></script>
<script>
window.addEventListener("load", function(){
window.cookieconsent.initialise({
"palette": {
"popup": {
"background": "#000"
},
"button": {
"background": "#f1d600"
}
},
"position": "bottom-right"
})});
</script>
</head>
<body data-spy="scroll" data-target="#navbar-side" data-offset="55">
<div class="navbar navbar-inverse navbar-fixed-top" role="navigation">
<div class="container clearfix">
<div class="navbar-header">
<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false" aria-controls="navbar">
<span class="sr-only">Toggle navigation</span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="navbar-brand hidden-xs" href="{{ url_for('main.screen') }}"><img src="{{ url_for('static', filename='img/icon-48x48.png') }}" style="max-width:100px;margin-left:-7px;margin-top: -13px;float:left;margin-right:5px;" width="48px"/></a>
<a class="navbar-brand visible-xs" href="{{ url_for('main.screen') }}"><img src="{{ url_for('static', filename='img/icon-32x32.png') }}" style="max-width:100px; margin-top: -7px;" width="32px"/></a>
</div>
<div id="navbar" class="navbar-collapse collapse">
<ul class="nav navbar-nav navbar-left">
<li><a href="{{ url_for('species.species_overview') }}">Species</a></li>
<li>
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Tools <span class="caret"></span></a>
<ul class="dropdown-menu">
<li class="dropdown-header">Expression Profiles</li>
<li><a href="{{ url_for('profile_comparison.profile_comparison_main') }}">Compare profiles</a></li>
<li><a href="{{ url_for('heatmap.heatmap_main') }}">Create heatmap</a></li>
<li><a href="{{url_for('expression_profile.export_expression_levels')}}">Export expression levels</a></li>
<li class="divider"></li>
<li class="dropdown-header">Expression Specificity</li>
<li><a href="{{ url_for('specificity_comparison.specificity_comparison_main') }}">Compare specificities</a></li>
<li><a href="{{ url_for('search.search_specific_profiles') }}">Find specific profiles</a></li>
<li class="divider"></li>
<li class="dropdown-header">Co-expression Networks</li>
<li><a href="{{ url_for('custom_network.custom_network_main') }}">Create custom network</a></li>
<li><a href="{{ url_for('search.search_enriched_clusters') }}">Find enriched clusters</a></li>
</ul>
</li>
<li>
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Search <span class="caret"></span></a>
<ul class="dropdown-menu">
<li><a href="{{ url_for('search.advanced') }}">Search <span class="text-muted">(advanced)</span></a></li>
{% if g.blast_enabled %}
<li class="divider"></li>
<li><a href="{{ url_for('blast.blast_main') }}">BLAST</a></li>
{% endif %}
</ul>
</li>
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<form class="navbar-form" role="search" method="post" id="search-form" name="search-form" action="{{ url_for('search.simple') }}">
{{ g.search_form.csrf_token }}
<div class="form-group input-group">
{{ g.search_form.terms(class_="form-control", placeholder="Search") }}
<div class="input-group-btn"><button type="submit" class="btn btn-primary" value="Search" data-toggle="modal" data-target="#loaderModal"><i class="fa fa-search"></i></button></div>
</div>
</form>
</li>
<li>
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Help <span class="caret"></span></a>
<ul class="dropdown-menu">
<li><a href="#">Tutorial <span class="text-muted">(Coming soon)</span></a></li>
<li><a href="#">FAQ <span class="text-muted">(Coming soon)</span></a></li>
<li><a href="{{ url_for('main.contact') }}">Contact</a></li>
</li>
</ul>
</li>
<li class="dropdown">
{% if g.login_enabled %}
{% if current_user.is_authenticated %}
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false"><i class="fa fa-user"></i> <strong class="hidden-sm hidden-md">{{ current_user.username }}</strong></a>
<ul class="dropdown-menu">
<li><a href="{{ url_for('auth.logout') }}"><i class="fa fa-sign-out"></i> Log out</a></li>
{% if current_user.is_administrator %}
<li role="separator" class="divider"></li>
<li><a href="{{ url_for('admin.index') }}"><i class="fa fa-cogs"></i> Admin panel</a></li>
{% endif %}
</ul>
{% else %}
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false"><span class="hidden-sm hidden-md">Not logged in!</span><span class="hidden-xs hidden-lg"><i class="fa fa-cogs" aria-hidden="true"></i></span></a>
<ul class="dropdown-menu">
<li><a href="{{ url_for('auth.login') }}"><i class="fa fa-sign-in"></i> Log in</a></li>
<li><a href="{{ url_for('auth.register') }}"><i class="fa fa-user-plus"></i> Register</a></li>
</ul>
{% endif %}
{% endif %}
</li>
{% if g.msg %}
<li class="dropdown">
<a href="#" data-toggle="popover" data-html="true" data-placement="bottom" title="{{ g.msg_title }}" data-content="{{ g.msg }}"><i class="fa fa-envelope"><span class="badge badge-notify">!</span></i></a>
</li>
{% endif%}
</ul>
</div>
</div>
</div>
<!-- Code to get flash function working -->
<div class="container">
{% for category, message in get_flashed_messages(with_categories=true) %}
<br />
<div class="alert alert-{{category}} alert-dismissable">
<button type="button" class="close" data-dismiss="alert" aria-hidden="true">&times;</button>
{{ message }}
</div>
{% endfor %}
</div>
<div class="container">
{% block container %}{% endblock %}
</div>
<footer class="footer" id="footer">
<div class="container">
<div class="row">
<div class="col-xs-2"><strong class="text-muted"><a href="{{ url_for('main.features') }}" class="text-muted">CoNekT</a></strong></div>
<div class="col-xs-2"><a href="{{ url_for('main.about') }}" class="text-muted">About</a></div>
<div class="col-xs-2"><a href="{{ url_for('main.contact') }}" class="text-muted">Contact</a></div>
<div class="col-xs-2"><a href="{{ url_for('main.disclaimer') }}" class="text-muted">Disclaimer</a></div>
<div class="col-xs-2"><a href="{{ url_for('main.privacy_policy') }}" class="text-muted">Privacy policy</a></div>
{% if g.imprint %}
<div class="col-xs-2"><a href="{{ url_for('main.imprint') }}" class="text-muted">Imprint</a></div>
{% endif %}
</div>
</div>
</footer>
<div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel">
<div class="modal-dialog" role="document" style="width:1000px;height:800px;">
<div class="modal-content">
</div>
</div>
</div>
<div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel">
<div class="modal-dialog" role="document" style="width:1000px;height:800px;">
<div class="modal-content">
<div class="modal-body">
<div id="leafy_loader"></div>
<p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p>
<p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style="">Close</button></p>
</div>
</div>
</div>
</div>
<script src="{{ url_for('static', filename='js/jquery.min.js') }}"></script>
<script src="{{ url_for('static', filename='js/bootstrap.min.js') }}"></script>
<script src="{{ url_for('static', filename='js/stupidtable.min.js') }}"></script>
<script src="{{ url_for('static', filename='js/TweenMax.min.js') }}"></script>
<script src="{{ url_for('static', filename='js/jquery.qtip.min.js') }}"></script>
<script src="{{ url_for('static', filename='js/planet_loader.js') }}"></script>
<!-- code to reload modal on each click -->
<script>
function init_qtip() {
$('.qtip_tooltip').each(function() {
$(this).qtip({
content: {
text: function(event, api) {
$.ajax({
url: api.elements.target.attr('qtip_href')
})
.then(function(content) {
// Set the tooltip content upon successful retrieval
api.set('content.text', content);
}, function(xhr, status, error) {
// Upon failure... set the tooltip content to error
api.set('content.text', status + ': ' + error);
});
return 'Loading...'; // Set some initial text
}
},
show: {
effect: function() {
$(this).fadeTo(500, 1);
}
},
hide: {
effect: function() {
$(this).fadeTo(500, 0);
}
},
position: {
viewport: $(window)
},
style: 'qtip-bootstrap'
});
});
}
$(function () {
init_qtip();
$("#leafy_loader").html(get_loader_svg('loader_leafy'));
init_planet_loader('loader_leafy');
$('[data-toggle="popover"]').popover({container: 'body'});
$('a[data-target=#helpModal], abbr[data-target=#helpModal]').click(function(ev) {
ev.preventDefault();
var target = $(this).attr("href");
// load the url and show modal on success
$("#helpModal .modal-content").load(target, function() {
$("#helpModal").modal("show");
});
});
});
</script>
<script src="{{ url_for('static', filename='js/planet_pagination.js') }}"></script>
<script src="{{ url_for('static', filename='js/planet_ajax_table.js') }}"></script>
<script type="text/javascript">
var csrf_token = "{{ csrf_token() }}";
$.ajaxSetup({
beforeSend: function(xhr, settings) {
if (!/^(GET|HEAD|OPTIONS|TRACE)$/i.test(settings.type) && !this.crossDomain) {
xhr.setRequestHeader("X-CSRFToken", csrf_token);
}
}
});
</script>
{% block extrajs %}{% endblock %}
</body>
</html>