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LICENSE.md -
README.md -
conda_env/chpv5.yml -
docs/README.md -
docs/alignment/bisulfite/BALv1.xml -
docs/alignment/bisulfite/RBAv0.xml -
docs/alignment/genome/GALv1.xml -
docs/alignment/transcriptome/SALv1.xml -
docs/alignment/transcriptome/SALv2.xml -
docs/interpretation/CSSv1.xml -
docs/interpretation/RNBv0.xml -
docs/interpretation/RNBv1.xml -
docs/interpretation/TFAv1.xml -
docs/misc/DCCdl.xml -
docs/misc/DCCul.xml -
docs/misc/THBv1.xml -
docs/misc/THBv2.xml -
docs/misc/THBv3.xml -
docs/quantification/bisulfite/MCSv0.xml -
docs/quantification/bisulfite/MCSv1.xml -
docs/quantification/bisulfite/MCSv2.xml -
docs/quantification/bisulfite/MCSv3.xml -
docs/quantification/chip-seq/CHPv0.xml -
docs/quantification/chip-seq/CHPv1.xml -
docs/quantification/chip-seq/CHPv2.xml -
docs/quantification/chip-seq/CHPv3.xml -
docs/quantification/chip-seq/CHPv4.xml -
docs/quantification/dnase-seq/DHSv1.xml -
docs/quantification/dnase-seq/DHSv2.xml -
docs/quantification/dnase-seq/DHSv3.xml -
docs/quantification/nome-seq/NCSv1.xml -
docs/quantification/nome-seq/NCSv2.xml -
docs/quantification/transcriptome/EXPv1.xml -
docs/quantification/transcriptome/LXPv1.xml -
docs/quantification/transcriptome/SXPv1.xml -
docs/quantification/transcriptome/SXPv2.xml -
publication/README.md -
publication/pyvalid.zip -
publication/supp_file_1_process_raw.xml -
publication/supp_file_2_process_css.xml -
publication/supp_file_3_style.css -
publication/supp_file_4_analysis_metadata.amd.tsv -
publication/supp_file_5_CHPv2.xml -
publication/supp_file_6.amd.tsv -
publication/supp_file_7_schema.xsd -
publication/supp_files.zip -
template/README.md -
template/deep_process_schema.xsd -
template/deep_process_style.css -
template/deep_process_template.xml -
validation/README.md -
validation/conda_py2_mdvalid.yml -
validation/conda_py3_mdvalid.yml -
validation/mdvalid.py