Hi, I am Mario.
As a team leader at the MPI-HLR, I’m involved in aspects of recent developments in applied bioinformatics, strategic planning of IT infrastructure, project management and teaching. My research interest is the implementation and application of new large-scale methods/workflows for the analysis of -omics data, more recently with a focus on single cell resolution. I’m also fascinated by opportunities given to bioinformaticians by latest technologies such as cloud computing.
Projects
TOBIAS: A complete framework for performing footprinting analysis on ATAC-seq data, published on January 10, 2020 in Software.
i2dash: Iterative & Interactive dashboards, published on January 08, 2020 in Software.
UROPA: a tool for Universal RObust Peak Annotation, published on September 05, 2019 in Software.
LimiTT: link miRNAs to targets, published on May 11, 2016 in Software.
MIRPIPE: quantification of microRNAs in niche model organisms, published on August 26, 2014 in Software.
Newt-omics: a comprehensive repository for omics data from the newt Notophthalmus viridescens, published on February 20, 2013 in Software.